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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810751.1_cds_XP_016496344.1_10574
CDS Infomation

[gene=LOC107815299] [db_xref=GeneID:107815299] [protein=probable sulfate transporter 3.5] [protein_id=XP_016496344.1] [location=join(43901..44213,45547..45754,46380..46551,47500..47565,47671..47784,48311..48427,48636..48762,48889..49175,49328..49515,50037..50119,50186..50262,50685..50858)] [gbkey=CDS]
Sequence

ATGAGTTCTCCTAAGAAATCATTGCATGGGGTTAACTATGCACCACCACGTAGTTTTGGA
ACAGTTCTTAAAGCAAATTTAAAAGAAACACTTTTTCCAGATGATCCATTCCATGAATTC
AAGAACGAGAAACTTTCAATCAGAATTCAAAAGGGAATTCAATATTTTGTTCCAATATTT
CAATGGTTGCCTAAGTATAATTTAGGGTTATTCAAGTTTGATCTTCTTGCTGGAATTACC
ATTGCTAGTCTTGCAATCCCACAAGGAATAAGCTACGCGAAACTCGCCAATCTTCCTCCG
ATTATCGGACTCTATTCAAGCTTTGTTCCTCCTCTTATTTATGCTGTTTTTGGAAGTTCA
AAACATCTTGCTGTTGGGACAGTGGCAACTTGCTCATTACTTATTGCTGAATCCATTCAA
GAAAAAGTTAAACCTCAGGAAAATATGCAATTGTACCTCAGTTTGTTCTACACAGCCACC
TTTGTCTCTGGTTTGGTGCAAACAGCCTTGGGTGTGCTAAGGCTTGGATTTTTGGTGGAT
TTTCTATCACATTCAACAATTACTGGATTTATGGGAGGGACAGCAGTAATTATCTGCTTA
CAGCAACTGAAGGGCATCCTTGGCTTGAAACATTTCACTAGCCATACTGATGTTGTTCAT
GTTTTACGTTCTGTCTTTGAAAACAGAAAAGAGTGGACATGGCAGTGTGCAGTTGTTGGT
GTAATCTTCCTTGTCTTCCTACAATTATCTAGATATGTGAGAAAGAAGAAACCAAATCTT
TTTTGGGTTTCAGCCATTGCTCCAATTATTGTTGTCATACTTGGCTGCCTTTTTGCTTAT
TTATTCCATGCTGAGAAACATGGCATTGCCATTGTTGGTGAATTGAGTAAAGGAATAAAT
CCATCATCCATTCATCTTCTAACTTTTAACCCGGATTATGTATATGTAGCTGTAAAAGCT
GGAATTATCACAGCAATTATTTCTTTAGCTGAAGGAATAGCTATTGGAAGGAGTTTCTCC
ATTATGAATAATGAACAAATTGATGGCAATAAGGAGATGGTAGCAATTGGCCTTATGAAT
ATTGCTGGCTCTTTCACTTCTTGCTACTTGACTACGGGGCCATTTTCAAAAACTGCGGTG
AACCACAACGCGGGATGCAAGACTCAAATGTCAAATGTAGTCATGTCACTCTGCATGTTG
CTAACCCTACTATTTCTGGCTCCGCTCTTTGGCTACACACCACTCGTTGCTCTCTCTGCT
ATTATCATGTCTGCAATGCTTGGCCTAATTGATTATGAGAAGTTCTATCACCTCTACAAG
ACAGACAAATTTGATTTCTTGATTTGTATGGTTGCCTTTTTGGGTGTTGCCTTTATAAGC
ATGGACATGGGACTCATGATGTCGGTTGGACTTGCCTTGGTTAGAGCACTTCTATATGTA
GCAAGGCCACCAACTTGCAAGCTTGGAAACATAACAGAAACTGTGTTTAGAGACATAGAA
CAATATCCTGGTGTAGATGGAATTCAAGGAATTCTGATTTTGAAGCTTGGTTCTCCAATA
TACTTCCCAAATAGCAACTATGTCAGAGAAAGGATTCTAAGATGGGTCAGAGATGAGCAA
TCTCTTGAAAGCTCTAAAAGAAATGAAGTTGAATTCTTGATACTAGATTTTGGAGGTGTT
ACATCAATTGACATAACGGGTGTTGAAACTTTATTTGAAATTCGTAAATCCCTAGGCGCA
AAAGGGATCAAGATAATATTGGTTAATCCAAGATTGGGAGTTATGGAAAAGTTGATAGTG
ACAAGATTCATAGATGTGATTGGAAAGGAATCAGTGTTCTTAACTATTGAAGATGCAATT
GAAACATGCAGATTTTCACTAAAATGTTCAAGCCAATCCAAAAGAGAAGATGTGGAAATT
GCTTAG

Peptide Sequence

PEP ID

XP_016496344.1
PEP Infomation

PREDICTED: probable sulfate transporter 3.5 [Nicotiana tabacum]
Sequence

MSSPKKSLHGVNYAPPRSFGTVLKANLKETLFPDDPFHEFKNEKLSIRIQKGIQYFVPIF
QWLPKYNLGLFKFDLLAGITIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYAVFGSS
KHLAVGTVATCSLLIAESIQEKVKPQENMQLYLSLFYTATFVSGLVQTALGVLRLGFLVD
FLSHSTITGFMGGTAVIICLQQLKGILGLKHFTSHTDVVHVLRSVFENRKEWTWQCAVVG
VIFLVFLQLSRYVRKKKPNLFWVSAIAPIIVVILGCLFAYLFHAEKHGIAIVGELSKGIN
PSSIHLLTFNPDYVYVAVKAGIITAIISLAEGIAIGRSFSIMNNEQIDGNKEMVAIGLMN
IAGSFTSCYLTTGPFSKTAVNHNAGCKTQMSNVVMSLCMLLTLLFLAPLFGYTPLVALSA
IIMSAMLGLIDYEKFYHLYKTDKFDFLICMVAFLGVAFISMDMGLMMSVGLALVRALLYV
ARPPTCKLGNITETVFRDIEQYPGVDGIQGILILKLGSPIYFPNSNYVRERILRWVRDEQ
SLESSKRNEVEFLILDFGGVTSIDITGVETLFEIRKSLGAKGIKIILVNPRLGVMEKLIV
TRFIDVIGKESVFLTIEDAIETCRFSLKCSSQSKREDVEIA

Transcript Sequence

Gene sequence data has not been registered.